Day 1: Self-guided introduction to Linux and HPC (available 2 weeks ahead of workshop)

Day 2: Introduction to HTS, RAD-seq data and QC. File format basics. de novo RADseq variant calling with Stacks.

Day 3: Reference mapping-based variant calling with Stacks and Freebayes.

Day 4: Filtering and reformatting variant call sets. Basic population structure analyses and QC.

Interleaf is a connective space for graduate students, post-docs, and scholars to step into the in-between. This weekly group offers both writing accountability and refuge, a structured yet gentle space that interrupts isolation with presence.

Drop in for all or part(s) of the meeting as your capacity allows. You are welcome to stop in late or leave early.

Fourth year dental students will be asked to reflect upon their experiences in externships of various specialties. Underclassmen will have the chance to ask questions and pizza will be provided

Day 1: Self-guided introduction to Linux and HPC (available 2 weeks ahead of workshop)

Day 2: Introduction to HTS, RAD-seq data and QC. File format basics. de novo RADseq variant calling with Stacks.

Day 3: Reference mapping-based variant calling with Stacks and Freebayes.

Day 4: Filtering and reformatting variant call sets. Basic population structure analyses and QC.